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Uranium in PDB 1bzo: Three-Dimensional Structure of Prokaryotic Cu,Zn Superoxide Dismutase From P.Leiognathi, Solved By X-Ray Crystallography.

Enzymatic activity of Three-Dimensional Structure of Prokaryotic Cu,Zn Superoxide Dismutase From P.Leiognathi, Solved By X-Ray Crystallography.

All present enzymatic activity of Three-Dimensional Structure of Prokaryotic Cu,Zn Superoxide Dismutase From P.Leiognathi, Solved By X-Ray Crystallography.:
1.15.1.1;

Protein crystallography data

The structure of Three-Dimensional Structure of Prokaryotic Cu,Zn Superoxide Dismutase From P.Leiognathi, Solved By X-Ray Crystallography., PDB code: 1bzo was solved by D.Bordo, D.Matak, K.Djinovic-Carugo, C.Rosano, A.Pesce, M.Bolognesi, M.E.Stroppolo, M.Falconi, A.Battistoni, A.Desideri, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 24.70 / 2.10
Space group H 3 2
Cell size a, b, c (Å), α, β, γ (°) 86.890, 86.890, 99.010, 90.00, 90.00, 120.00
R / Rfree (%) 19 / 26

Other elements in 1bzo:

The structure of Three-Dimensional Structure of Prokaryotic Cu,Zn Superoxide Dismutase From P.Leiognathi, Solved By X-Ray Crystallography. also contains other interesting chemical elements:

Copper (Cu) 1 atom
Zinc (Zn) 1 atom

Uranium Binding Sites:

The binding sites of Uranium atom in the Three-Dimensional Structure of Prokaryotic Cu,Zn Superoxide Dismutase From P.Leiognathi, Solved By X-Ray Crystallography. (pdb code 1bzo). This binding sites where shown within 5.0 Angstroms radius around Uranium atom.
In total 2 binding sites of Uranium where determined in the Three-Dimensional Structure of Prokaryotic Cu,Zn Superoxide Dismutase From P.Leiognathi, Solved By X-Ray Crystallography., PDB code: 1bzo:
Jump to Uranium binding site number: 1; 2;

Uranium binding site 1 out of 2 in 1bzo

Go back to Uranium Binding Sites List in 1bzo
Uranium binding site 1 out of 2 in the Three-Dimensional Structure of Prokaryotic Cu,Zn Superoxide Dismutase From P.Leiognathi, Solved By X-Ray Crystallography.


Mono view


Stereo pair view

A full contact list of Uranium with other atoms in the U binding site number 1 of Three-Dimensional Structure of Prokaryotic Cu,Zn Superoxide Dismutase From P.Leiognathi, Solved By X-Ray Crystallography. within 5.0Å range:
probe atom residue distance (Å) B Occ
A:U502

b:41.0
occ:0.33
 OD2 A:ASP76 2.6 25.1 1.0
OD1 A:ASP76 2.7 62.0 1.0
CG A:ASP76 3.0 40.0 1.0
CB A:ASP76 4.5 19.8 1.0
NZ A:LYS68A 4.7 61.3 1.0
CE A:LYS68A 5.0 32.5 1.0

Uranium binding site 2 out of 2 in 1bzo

Go back to Uranium Binding Sites List in 1bzo
Uranium binding site 2 out of 2 in the Three-Dimensional Structure of Prokaryotic Cu,Zn Superoxide Dismutase From P.Leiognathi, Solved By X-Ray Crystallography.


Mono view


Stereo pair view

A full contact list of Uranium with other atoms in the U binding site number 2 of Three-Dimensional Structure of Prokaryotic Cu,Zn Superoxide Dismutase From P.Leiognathi, Solved By X-Ray Crystallography. within 5.0Å range:
probe atom residue distance (Å) B Occ
A:U559

b:35.5
occ:0.50
 OE1 A:GLU53B 2.6 27.3 1.0
OE2 A:GLU53B 2.8 31.4 1.0
CD A:GLU53B 3.1 30.3 1.0
N A:ASP53D 4.1 27.1 1.0
N A:GLY53E 4.5 29.2 1.0
CA A:ASP53D 4.6 36.1 1.0
CG A:GLU53B 4.6 17.4 1.0
O A:HOH565 4.7 33.4 1.0

Reference:

D.Bordo, D.Matak, K.Djinovic-Carugo, C.Rosano, A.Pesce, M.Bolognesi, M.E.Stroppolo, M.Falconi, A.Battistoni, A.Desideri. Evolutionary Constraints For Dimer Formation in Prokaryotic Cu,Zn Superoxide Dismutase. J.Mol.Biol. V. 285 283 1999.
ISSN: ISSN 0022-2836
PubMed: 9878406
DOI: 10.1006/JMBI.1998.2267
Page generated: Fri Oct 11 10:46:06 2024

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