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Uranium in PDB 3v2i: Structure of A Peptidyl-Trna Hydrolase (Pth) From Burkholderia Thailandensis

Enzymatic activity of Structure of A Peptidyl-Trna Hydrolase (Pth) From Burkholderia Thailandensis

All present enzymatic activity of Structure of A Peptidyl-Trna Hydrolase (Pth) From Burkholderia Thailandensis:
3.1.1.29;

Protein crystallography data

The structure of Structure of A Peptidyl-Trna Hydrolase (Pth) From Burkholderia Thailandensis, PDB code: 3v2i was solved by Seattle Structural Genomics Center For Infectious Disease (Ssgcid), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 50.00 / 1.65
Space group I 2 2 2
Cell size a, b, c (Å), α, β, γ (°) 53.340, 93.580, 106.760, 90.00, 90.00, 90.00
R / Rfree (%) 17.5 / 20.5

Uranium Binding Sites:

The binding sites of Uranium atom in the Structure of A Peptidyl-Trna Hydrolase (Pth) From Burkholderia Thailandensis (pdb code 3v2i). This binding sites where shown within 5.0 Angstroms radius around Uranium atom.
In total only one binding site of Uranium was determined in the Structure of A Peptidyl-Trna Hydrolase (Pth) From Burkholderia Thailandensis, PDB code: 3v2i:

Uranium binding site 1 out of 1 in 3v2i

Go back to Uranium Binding Sites List in 3v2i
Uranium binding site 1 out of 1 in the Structure of A Peptidyl-Trna Hydrolase (Pth) From Burkholderia Thailandensis


Mono view


Stereo pair view

A full contact list of Uranium with other atoms in the U binding site number 1 of Structure of A Peptidyl-Trna Hydrolase (Pth) From Burkholderia Thailandensis within 5.0Å range:
probe atom residue distance (Å) B Occ
A:U203

b:30.0
occ:1.00
CZ A:PHE47 4.0 23.5 1.0
CE2 A:PHE47 4.2 22.3 1.0
CE1 A:PHE47 4.3 23.6 1.0
O A:LEU38 4.6 25.2 1.0
CD2 A:PHE47 4.6 20.8 1.0
CD1 A:PHE47 4.7 21.6 1.0
CG A:PHE47 4.9 19.9 1.0

Reference:

L.Baugh, L.A.Gallagher, R.Patrapuvich, M.C.Clifton, A.S.Gardberg, T.E.Edwards, B.Armour, D.W.Begley, S.H.Dieterich, D.M.Dranow, J.Abendroth, J.W.Fairman, D.Fox, B.L.Staker, I.Phan, A.Gillespie, R.Choi, S.Nakazawa-Hewitt, M.T.Nguyen, A.Napuli, L.Barrett, G.W.Buchko, R.Stacy, P.J.Myler, L.J.Stewart, C.Manoil, W.C.Van Voorhis. Combining Functional and Structural Genomics to Sample the Essential Burkholderia Structome. Plos One V. 8 53851 2013.
ISSN: ESSN 1932-6203
PubMed: 23382856
DOI: 10.1371/JOURNAL.PONE.0053851
Page generated: Thu Oct 29 07:04:00 2020

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