Uranium in PDB 1b3h: Oligo-Peptide Binding Protein Complexed with Lysyl- Cyclohexylalanyl-Lysine

The structure of Oligo-Peptide Binding Protein Complexed with Lysyl- Cyclohexylalanyl-Lysine, PDB code: 1b3h was solved by T.G.Davies, J.R.H.Tame, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	20.00 / 2.00
Space group	P 21 21 21
Cell size a, b, c (Å), α, β, γ (°)	109.673, 75.574, 70.187, 90.00, 90.00, 90.00
R / Rfree (%)	19 / 24

The binding sites of Uranium atom in the Oligo-Peptide Binding Protein Complexed with Lysyl- Cyclohexylalanyl-Lysine (pdb code 1b3h). This binding sites where shown within 5.0 Angstroms radius around Uranium atom.
In total 8 binding sites of Uranium where determined in the Oligo-Peptide Binding Protein Complexed with Lysyl- Cyclohexylalanyl-Lysine, PDB code: 1b3h:
Jump to Uranium binding site number: 1; 2; 3; 4; 5; 6; 7; 8;

Uranium binding site 1 out of 8 in the Oligo-Peptide Binding Protein Complexed with Lysyl- Cyclohexylalanyl-Lysine


Mono view


Stereo pair view

A full contact list of Uranium with other atoms in the U binding site number 1 of Oligo-Peptide Binding Protein Complexed with Lysyl- Cyclohexylalanyl-Lysine within 5.0Å range: probe atom residue distance (Å) B Occ A:U518 b:31.8 occ:0.88 OD2 A:ASP323 2.4 27.4 1.0 CG A:ASP323 3.2 32.6 1.0 OD1 A:ASP323 3.5 31.0 1.0 CB A:ASP323 4.7 31.0 1.0 NZ A:LYS157 4.9 27.4 1.0 O A:HOH710 5.0 46.5 1.0

Uranium binding site 2 out of 8 in the Oligo-Peptide Binding Protein Complexed with Lysyl- Cyclohexylalanyl-Lysine


Mono view


Stereo pair view

A full contact list of Uranium with other atoms in the U binding site number 2 of Oligo-Peptide Binding Protein Complexed with Lysyl- Cyclohexylalanyl-Lysine within 5.0Å range: probe atom residue distance (Å) B Occ A:U519 b:37.2 occ:0.85 U A:U1520 4.2 38.2 0.8

Uranium binding site 3 out of 8 in the Oligo-Peptide Binding Protein Complexed with Lysyl- Cyclohexylalanyl-Lysine


Mono view


Stereo pair view

A full contact list of Uranium with other atoms in the U binding site number 3 of Oligo-Peptide Binding Protein Complexed with Lysyl- Cyclohexylalanyl-Lysine within 5.0Å range: probe atom residue distance (Å) B Occ A:U520 b:38.2 occ:0.81 U A:U1519 4.2 37.2 0.8 OD1 A:ASP459 4.2 60.6 1.0 OD2 A:ASP459 4.5 61.0 1.0 CG A:ASP459 4.6 59.0 1.0 CB A:PRO153 4.9 35.2 1.0

Uranium binding site 4 out of 8 in the Oligo-Peptide Binding Protein Complexed with Lysyl- Cyclohexylalanyl-Lysine


Mono view


Stereo pair view

A full contact list of Uranium with other atoms in the U binding site number 4 of Oligo-Peptide Binding Protein Complexed with Lysyl- Cyclohexylalanyl-Lysine within 5.0Å range: probe atom residue distance (Å) B Occ A:U521 b:34.7 occ:0.60 OE1 A:GLU251 2.5 42.2 1.0 OD2 A:ASP369 3.2 48.2 1.0 CD A:GLU251 3.7 46.9 1.0 CG A:ASP369 4.1 46.3 1.0 NZ A:LYS373 4.2 52.7 0.0 CG A:GLU251 4.4 46.4 1.0 OE2 A:GLU251 4.5 45.5 1.0 CG2 A:VAL230 4.6 37.4 1.0 CB A:ASP369 4.8 42.9 1.0 OD1 A:ASP369 4.9 47.1 1.0 CE A:LYS373 5.0 51.4 0.0

Uranium binding site 5 out of 8 in the Oligo-Peptide Binding Protein Complexed with Lysyl- Cyclohexylalanyl-Lysine


Mono view


Stereo pair view

A full contact list of Uranium with other atoms in the U binding site number 5 of Oligo-Peptide Binding Protein Complexed with Lysyl- Cyclohexylalanyl-Lysine within 5.0Å range: probe atom residue distance (Å) B Occ A:U522 b:34.9 occ:0.86 OD1 A:ASP362 2.3 25.0 1.0 OD1 A:ASP410 2.5 28.0 1.0 CG A:ASP362 3.2 28.9 1.0 CG A:ASP410 3.3 29.7 1.0 OD2 A:ASP410 3.5 31.1 1.0 OD2 A:ASP362 3.8 28.2 1.0 NZ A:LYS281 4.0 42.9 1.0 N A:ASP362 4.2 30.1 1.0 CB A:ASP362 4.3 28.9 1.0 O A:HOH583 4.4 34.0 1.0 CB A:ASP410 4.7 27.4 1.0 CA A:PHE361 4.8 35.2 1.0 C A:PHE361 4.9 33.6 1.0 CA A:ASP362 4.9 30.8 1.0

Uranium binding site 6 out of 8 in the Oligo-Peptide Binding Protein Complexed with Lysyl- Cyclohexylalanyl-Lysine


Mono view


Stereo pair view

A full contact list of Uranium with other atoms in the U binding site number 6 of Oligo-Peptide Binding Protein Complexed with Lysyl- Cyclohexylalanyl-Lysine within 5.0Å range: probe atom residue distance (Å) B Occ A:U523 b:20.1 occ:0.31 OXT A:HIS517 2.7 41.3 1.0 O A:HIS517 2.9 44.3 1.0 C A:HIS517 3.2 41.5 1.0 U A:U1524 4.1 15.6 0.2 CA A:HIS517 4.7 40.7 1.0

Uranium binding site 7 out of 8 in the Oligo-Peptide Binding Protein Complexed with Lysyl- Cyclohexylalanyl-Lysine


Mono view


Stereo pair view

A full contact list of Uranium with other atoms in the U binding site number 7 of Oligo-Peptide Binding Protein Complexed with Lysyl- Cyclohexylalanyl-Lysine within 5.0Å range: probe atom residue distance (Å) B Occ A:U524 b:15.6 occ:0.23 U A:U1523 4.1 20.1 0.3

Uranium binding site 8 out of 8 in the Oligo-Peptide Binding Protein Complexed with Lysyl- Cyclohexylalanyl-Lysine


Mono view


Stereo pair view

A full contact list of Uranium with other atoms in the U binding site number 8 of Oligo-Peptide Binding Protein Complexed with Lysyl- Cyclohexylalanyl-Lysine within 5.0Å range: probe atom residue distance (Å) B Occ A:U525 b:30.9 occ:0.46 OD2 A:ASP11 2.2 37.7 1.0 CG A:ASP11 3.2 37.6 1.0 CB A:ASP11 3.7 36.8 1.0 OD1 A:ASP11 4.3 37.6 1.0 O A:HOH716 4.9 47.4 1.0

T.G.Davies, R.E.Hubbard, J.R.Tame. Relating Structure to Thermodynamics: the Crystal Structures and Binding Affinity of Eight Oppa-Peptide Complexes. Protein Sci. V. 8 1432 1999.
ISSN: ISSN 0961-8368
PubMed: 10422831